BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB026B03LP1|AL428490
(886 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1435 1698 0.0
>3x_Contig1435
Length = 8899
Score = 1698 bits (849), Expect = 0.0
Identities = 873/887 (98%), Gaps = 1/887 (0%)
Strand = Plus / Plus
Query: 1 gatctgtaatgaaaatacggaggataaattgttagtaaaaataagactttattattatca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5532 gatctgtaatgaaaatacggaggataaattgttagtaaaaataagactttattattatca 5591
Query: 61 cagggtactagaggcacgaatgattggattataaaatgcaataatgcaatataatcacat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5592 cagggtactagaggcacgaatgattggattataaaatgcaataatgcaatataatcacat 5651
Query: 121 cattaaggaattgacttgttttatggatatcacttttgtcgtgcatgatttcgaaaattt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5652 cattaaggaattgacttgttttatggatatcacttttgtcgtgcatgatttcgaaaattt 5711
Query: 181 agtaataactgtgacatttcgtagagaacttatctgtcgatattctttcttagcmagcmt 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |
Sbjct: 5712 agtaataactgtgacatttcgtagagaacttatctgtcgatattctttcttagcaagcat 5771
Query: 241 cagatgggtacagagatactaggcatacctcacttcmaagctttagtcatgcagattgct 300
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 5772 cagatgggtacagagatactaggcatacctcacttcaaagctttagtcatgcagattgct 5831
Query: 301 taatatattaacagatgtaatattttgttcgttagatcattttcttacattatctttgtt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5832 taatatattaacagatgtaatattttgttcgttagatcattttcttacattatctttgtt 5891
Query: 361 atttcctcactcctggraacatatattcmttcattcatcttatgtttattaacatttcag 420
|||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 5892 atttcctcactcctggaaacatatattcattcattcatcttatgtttattaacatttcag 5951
Query: 421 ttatcgtaaacgtataggtaatccmatattcmatcattccttttgcctttgavagtagta 480
|||||||||||||||||||||||| |||||| |||||||||||||||||||| |||||||
Sbjct: 5952 ttatcgtaaacgtataggtaatccaatattcaatcattccttttgcctttgaaagtagta 6011
Query: 481 ccactttcttatagtgttttsatgtttcacatacttctctgatggacttgaattgc-cag 539
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||
Sbjct: 6012 ccactttcttatagtgttttaatgtttcacatacttctctgatggacttgaattgcaaag 6071
Query: 540 ctctcavatcagccttcaattctggagagttgttttccaagtcgatgaaagcttgggcaa 599
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6072 ctctcaaatcagccttcaattctggagagttgttttccaagtcgatgaaagcttgggcaa 6131
Query: 600 cttgcaattccaattcagttggagcttgggacaaaatcttggcttgtgggtcagacatcg 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6132 cttgcaattccaattcagttggagcttgggacaaaatcttggcttgtgggtcagacatcg 6191
Query: 660 tggcttatgtttccttgcttggttatatcaagaactcctctaatggaaaaaaatcgctaa 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6192 tggcttatgtttccttgcttggttatatcaagaactcctctaatggaaaaaaatcgctaa 6251
Query: 720 aacagtgctgcaactaatattcaactaacgctaatttattgtatatwactattagacctc 779
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 6252 aacagtgctgcaactaatattcaactaacgctaatttattgtatataactattagacctc 6311
Query: 780 atttcaattgtttaaacagtaaaccttcaattctgaaaaagttgctgagactgggatgca 839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6312 atttcaattgtttaaacagtaaaccttcaattctgaaaaagttgctgagactgggatgca 6371
Query: 840 ttacgatgaatgaaacctactactggcctggtctggrtagctcgtag 886
|||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 6372 ttacgatgaatgaaacctactactggcctggtctggatagctcgtag 6418
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.712 1.32
Gapped
Lambda K H
1.39 0.712 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6406
Number of Sequences: 1807
Number of extensions: 6406
Number of successful extensions: 49
Number of sequences better than 1.0e-20: 1
length of query: 886
length of database: 10,358,551
effective HSP length: 16
effective length of query: 870
effective length of database: 10,329,639
effective search space: 8986785930
effective search space used: 8986785930
T: 0
A: 40
X1: 5 (10.0 bits)
X2: 14 (28.0 bits)
S1: 12 (24.5 bits)
S2: 50 (100.5 bits)